71. Aragno, M. 1996. Des microbes et des hommes, p. 171-187. Natures en tête, GHK, Musée d'Ethnographie, Neuchâtel.

72. Beffa, T., M. Blanc, and M. Aragno. 1996. Obligately and facultatively autotrophic, sulfur- and hydrogen- oxidizing thermophilic bacteria isolated from hot composts. Arch. Microbiol. 165:34-40

73. Beffa, T., M. Blanc, L. Marilley, J. Lott Fischer, P-F. Lyon, and M. Aragno. 1996. Taxonomic and metabolic microbial diversity during composting, p. 149-161. In M. De Bertoldi, P. Sequi, B. Lemmes, and T. Papi (eds.), Blackies Academic & Professional, London, UK.

74. Beffa, T., M. Blanc, P-F. Lyon, G. Vogt, M. Marchiani, J. Lott Fischer, and M. Aragno. 1996. Isolation of Thermus strains from hot composts (60-80°C). Appl. Environ. Microbiol. 62:1723-1727.

75. Blanc, M., T. Beffa, and M. Aragno. 1996. Biodiversity of thermophilic bacteria isolated from compost piles, p. 1087-1090. In M. De Bertoldi and P. Segui (eds.), The science of composting. Blackie Academic and Professional, London.

76. Fahrni, H-P., M. Gandolla, and C. Fischer. 1996. Politika gospodarenja otpadom u Svicarskoj (en serbo-croate) Gaspodarstvo i okolis. Gospodarstvo i okolis 5:431-434.

77. Fischer, C., M. Gandolla, and M. Aragno. 1996. Procesos de generaction de calor en torno a un vertedero clausurado: causas del fenomeno y posibles consecuencias para su gestion y seguridad. Residuos 30:30-38.

78. Fischer, C., M. Gandolla, and M. Aragno. 1996. Heat generating processes in sanitary landfill: causes of the phenomenon and possible consequences for landfill management and security. Rifiuti Solidi 10:323-333.

79. Fischer, C., M. Gandolla, and M. Aragno. Heat-generation in sanitary landfills: cause of the phenomenon and consequences for landfill construction, management and security. 1996. Rio de Janerio, Anais do III SIBESA, Simposio Italo-Brasileiro de Engeharia Sanitaria e Ambiental ABES.

80. Job, C., J. Keller, and D. Job. 1996. Degradation of unbleached sulphite pulp paper treated in solid state conditions with five species of the brown rot Gloeophyllum. Material und Organismen 30:105-117.

81. Job, D. 1996. Environmental growth requirements for sumbsersed cultures of the ectomycorrhizal fungus Coenococcum geophilum Fr. Cryptog. Mycol. 17:165-171.

82. Keller, J. and D. Job. 1996. Modern aspects of fungal taxonomy. Mycol. Helv. 8:73-107.

83. Lott Fischer, J. 1996. Pilzsporen und Kompost. Kompostkrümel 1/96:11-12.

84. Lott-Fischer, J., P-F. Lyon, T. Beffa, and M. Aragno. Composting of organic garden and kitchen waste in open-air windrows: influence of turning frequency on the development of Aspergillus Fumigatus. 1207-1210. 1996. The science of composting.

85. Lyon, P-F. Industrial composting of biodegradable wastes. Proceeding of the conference. 1996. Berne.

86. Marchiani, M. A polyphasic approach of strictly thermophilic hydrogen- oxidizing bacteria, isolated from several and distant geothermal areas of the globe. 1996. Thesis, University of Neuchâtel.

87. Nusbaumer, C., D. Job, and M. Aragno. 1996. Etude de l'altération par les champignons de l'état physico- chimique des composés lignocellulosiques dans un processus naturel de compostage. Mycol. Helv. 8:51-67.

88. Prince Sigrist, M-H. and D. Job. 1996. Etudes mycologique, entomologique et physico-chimique de troncs de Betula pendula en voie de dégradation. I. Répartition spatiale de l'état physico-chimique et de la mycoflore des troncs. Can. J. Bot. 74:1657-1664.

89. Rossi, P., N. Doerfliger, I. Müller, and M. Aragno. 1996. Traçage des eaux à l'aide de bactériophages. Gas-Wasser-Abwasser 76:41-49.



90. Balestra, U., C. Fischer, M. Aragno, J. Hunziker, and Z. Sharp. Stable carbon isotopes as a diagnosis tool of bacterial activity in landfills and composting systems. ISSM 96, Davos, CH. 1996.

91. Blanc, M., J. Lott Fischer, P-F. Lyon, T. Beffa, and M. Aragno. Heterotrophic spore-forming bacteria isolated from hot compost piles. of a poster presentation at the 55th Annual Meeting of SSM, Bern, CH . 1996.

92. Innocenti, A., F-R Mahrer, C. Rossier, and M, Aragno. Biomethanisation of organic refuse from restaurants. of a poster presented at the 56th Annual Meeting of SSM, St.Gallen, CH . 1996.

93. Lott Fischer, J. Composting of organic garden and kitchen wastes in open-air windrows: influence of the turning frequency on the development of Aspergillus fumigatus. SPP meeting, Bern . 1996.

94. Lott Fischer, J., T. Beffa, P-F. Lyon, M. Blanc, and M. Aragno. Composting of organic waste in open-air windrows: influence of the turning frequency on the development of Aspergillus fumigatus. of a poster presented at the 56th Annual Meeting of SSM, St.Gallen, CH . 1996.

95. Lyon, P-F., T. Beffa, J. Lott Fischer, M. Blanc, and M. Aragno. Eco-physiologie of highliy thermophilic bacteria isolated from hot compost in switzerland. 56th Annual Meeting of SSM, St.Gallen, CH . 1996.

96. Rossi, P., K. Formentin, and M. Aragno. Direct assessement of the behaviour of five bacterial viruses (bacteriophages) in underground freshwater environments using batch agitated experiments. of an oral presentation at the 1996 Int.Symposium on Subsurface Microbiology, Davos, CH . 1996.




72. Beffa, T., M. Blanc, and M. Aragno. 1996. Obligately and facultatively autotrophic, sulfur- and hydrogen- oxidizing thermophilic bacteria isolated from hot composts.

A variety of autotrophic, sulfur- and hydrogen-oxidizing thermophilic bacteria were isolated from thermogenic composts at temperatures of 60-80° C. All were penicillin G sensitive, which proves that they belong to the Bacteria domain. The obligately autotrophic, non-spore-forming strains were gram-negative rods growing at -80°C, with an optimum at 70-75°C, but only under microaerophilic conditions (5 oxygen). These strains had similar DNA G+C content (34.7-37.6 mol%) and showed a high DNA:DNA homology (70-87%) with Hydrogenobacter strains isolated from geothermal areas. The facultatively autotrophic strains isolated from hot composts were gram-variable rods that formed spherical and terminal endospores, for one strain. The strains grew at 55-75° C, with an optimum at 65-70° C. These bacteria were able to grow heterotrophically, or autotrophically with hydrogen; , they oxidized thiosulfate under mixotrophic growth conditions (e.g. pyruvate or hydrogen plus thiosulfate). These strains had similar DNA G+C content (60-64 mol%) to and high DNA:DNA homology (> 75%) with the reference strain of Bacillus schlegelii. This is the first report of thermogenic composts as habitats of thermophilic sulfur- and hydrogen-oxidizing bacteria, which to date have been known only from geothermal manifestations. This contrasts with the generally held belief that thermogenic composts at temperatures above 60° C support only a very low diversity of obligatory heterotrophic thermophiles related to Bacillus stearothermophilus.

73. Beffa, T., M. Blanc, L. Marilley, J. Lott Fischer, P-F. Lyon, and M. Aragno. 1996. Taxonomic and metabolic microbial diversity during composting.

A great variety and high numbers of aerobic thermophilic heterotrophic and/or autotrophic bacteria growing at temperatures between 60-80°C have been isolated from thermogenic (temperature 60-80°C) composts in several composting facilities in Switzerland. They include strains related to the genus Thermus (T. thermophilus, T. aquaticus, and several other new strains), Bacillus schlegelii, Hydrogenobacter spp., and of course heterotrophic sporeforming Bacilli. This contrasts with the generally held belief that thermogenic composts (> 60°C) support only a very low diversity of heterotrophic thermophiles. This bio-diversity suggests efficient decomposition of organic matter at temperatures above 60°C, and a good thermo-hygienization. During the terminal cooling or maturation phase of composts high numbers and a great metabolic diversity of mesophilic bacteria was observed, including nitrogen-fixers, sulfur-oxidizers, hydro-gen-oxidizers, nitrifyiers, and producers of extracellular polysaccharides or bacterial humin. This microbial diversityplays an essential role for compost stabilization. It is suggested that mature compost application improves soil chemistry and microbiology, and can thus be regarded beneficial for agriculture.

74. Beffa, T., M. Blanc, P-F. Lyon, G. Vogt, M. Marchiani, J. Lott Fischer, and M. Aragno. 1996. Isolation of Thermus strains from hot composts (60-80°C).

High numbers (10(7) to 10(10) cells per g [dry weight]) of heterotrophic, gram-negative, rod-shaped, non-sporeforming, aerobic, thermophilic bacteria related to the genus Thermus were isolated from thermogenic composts at temperatures between 65 and 82 degrees C. These bacteria were present in different types of wastes (garden and kitchen wastes and sewage sludge) and in all the industrial composting systems studied (open-air windows, boxes with automated turning and aeration, and closed bioreactors with aeration). Isolates grew fast on a rich complex medium at temperatures between 40 and 80 degrees C, with optimum growth between 65 and 75 degrees C. Nutritional characteristics, total protein profiles, DNA-DNA hybridization (except strain JT4), and restriction fragment length polymorphism profiles of the DNAs coding for the 16S rRNAs (16S rDNAs) showed that Thermus strains isolated from hot composts were closely related to Thermus thermophilus HB8. These newly isolated T. thermophilus strains have probably adapted to the conditions in the hot-compost ecosystem. Heterotrophic, ovalspore-forming, thermophilic bacilli were also isolated from hot composts, but none of the isolates was able to grow at temperatures above 70 degrees C. This is the first report of hot composts as habitats for a high number of thermophilic bacteria related to thegenus Thermus. Our study suggests that Thermus strains play an important role in organic-matter degradation during the thermogenic phase (65 to 80 degrees C) of the composting process.

78. Fischer, C., M. Gandolla, and M. Aragno. 1996. Heat generating processes in sanitary landfill: causes of the phenomenon and possible consequences for landfill management and security.

Abnormally high temperatures in landfills (even > 60°C) have been linked to the oxidation of organic matter and/or methane. Precise knowledge of the various processes involved (physical, chemical or biological reactions) is lacking and it is impossible to make adequate previsions.
However, for correct landfill construction and management, it is essential to acquire a better knowledge of these processes, of their origins and consequences, so as to adapt the technical components of a landfill (bottom lining, drainage systems, etc.) and avoid excessive heating by acting on the gas and leachate extraction. We present here a pluri-disciplinary study of high temperatures zones discovered on and near two sanitary landfills in Switzerland. On-site gas and temperature measurements, a survey by radio-magnetotelluric resistivity and the designing and study of a bench-scale model were used to elucidate the processes and organisms involved in this heat-generation.

85. Lyon, P-F. Industrial composting of biodegradable wastes. Proceeding of the conference. 1996. Berne.

Composting is a microbiological, aerobic, self-heating, process for the treatment of biodegradable wastes, allowing the recycling of organic matter. Interdisciplinary approaches are necessary to optimize this highly complex industrial operation. Research at our laboratory aims at specifically improving the thermogenic phase of composting. Research is carried out at our laboratory concerning the isolation and characterization of thermophilic bacteria active during the hot phase, as well as mesophilic bacteria active during the maturation phase of the composting process. Their role in the composting pro-cess and their degradation potential is evaluated. The knowledge about specific compost bacteria can be useful to optimize composting of industrial wastes, bioremediation (co-composting of contaminated soils), degradation of xenobiotics, and utilization of thermostable enzymes for agro-alimentary and other industrial applications For our study, we are working together with several industries, representing some of the most frequently used composting systems in Switzerland: Most of the compost is produced in open-air windrow systems. At some installation composting is done in boxes. There, an aeration system is nessecary to ensure sufficient oxygenation. The heaps are turned by automatic systems. At some sites, anaerobic fermentation of unstructured, moisture-rich kitchen waste is done prior to composting. The biogas produced is used to furnish energy to the composting plant. Composting can also be carried out in bioreactors. In field-studies the different parameters influencing the composting process are analyzed: The composition of waste, the turning frequency, the aeration cycle, and the compost humidity. The composting process is closely monitored by following the evolution of temperature, activity of micro-organisms (gas concentration), pH, organic matter content, dry weight, C/N, and other parameters. Simulation of the composting process in the laboratory can be carried out in a controlled, closed, bench-scale system, with predefined parameters, allowing a constant monitoring. The different steps of the composting process (collection of biodegradable wastes, pro-cessing) as well as the final product can offer certain health risks. These can be identified by monitoring the concentration of potentially pathogenic microorganisms (molds and bacteria) in the compost and in the air.




95. Lyon, P-F., T. Beffa, J. Lott Fischer, M. Blanc, and M. Aragno. Eco-physiologie of highliy thermophilic bacteria isolated from hot compost in switzerland.

A better knowledge of the ecophysiology of highly thermophilic aerobic bacteria active in compost is essential, because long periods of high temperatures is the only way to achieve good hygienization. When the composting process is realized with a good management, the thermophilic bacteria heat the compost piles and maintain high temperatures (60 to 80°C) during weeks in the whole material. We have carried out the study at three levels: full- and bench-scale composting and liquid culture in bioreactor. The actual conditions (temperature, gas concentration, pH, ... ) of industrial composting were monitored. We have analyzed four composting processes and determined the favorable environments in which highly thermophilic bacteria are active. Total microbial activity was measured and new strains were isolated. Bench-scale composting in the laboratory allowed to quantify the effect of various parameters (raw material, temperature, aeration, turning) on the bacterial activity and on the efficiency of the composting process. Cultures of bacteria isolated from hot compost were performed in a bioreactor. The growth capacities (growth rate) on different organic substrates were carried out in a large variety of conditions.
This study is supported by the Swiss National Science Foundation, project SPP BioTech Module 5 B, no 5002 - 038921.
Project title: Composting of organic wastes: Optimization of the thermogenic phase to overcome the hygienic and public health hazards.